Categories
Equipment Services

SynBioC

Equipment

Microreactor systems

Description                                              

Different microreactors are available at our research group. We use both complete systems and self-made systems by combining one or more pumps with a tubular reactor and/or a microchip. Within our lab, flow reactions with O2, CO2, H2, and CHF3 are possible. In-line work can be done by a Zaiput liquid/liquid separator and in-line analysis by an in-line FTIR (Bruker).

Complete systems

Labtrix® Start (Chemtrix)
Internal volume: 1, 5 or 10 µl depending on the reactor chip used
Temperature range: -15°C to 195°C
Pressures up to 25 bar
Wetted materials: glass, PEEK, PTFE, Techtron

KiloFlow® (Chemtrix)
Internal volume: 13 ml
Temperature range: 10°C to 150°C
Pressures up to 20 bar
Wetted materials: glass, PEEK, ETFE, perfluoroelastomer

X-CubeTM (ThalesNano)
Temperature range: 20°C to 200°C
Pressures up to 150 bar
Wetted material: stainless steel
Compatible with gases (H2, O2, …)
Compatible with catalyst cartridges (Pd/C, Raney Ni, …)

H Cube Mini (ThalesNano)
Temperature range: 20°C to 100°C
Pressure 1 bar to 100 bar
Flow rate 0.3-3 ml/min
Maximum hydrogen production rate 25-30 Nml/min
Water reservoir capacity 100 ml

Vapourtec Easy-MedChem V3
An adjustable packed bed column reactor – ambient to 150°C
A tube reactor assembly – ambient to 150°C
User interface with manual control software
3 V-3 pumps

Africa (Syrris)
Fully automated, flexible and easy-to-use microreactor system
Wide temperature range
Reagent pump module with flow rate range of 2.5-2500 µl/min

Pumps

ReaXus-Model 6010R (Teledyne ISCO)
High performance reciprocating peristaltic pump
Accurate flow rate control up to 10 ml/min
Pressure capability up to 6000 psi (414 bar)

WADose (Flusys)
Compact high-pressure dosing peristaltic pump (dual piston)
Dosing range 0.001-40 ml/min
Viscosity range up to 40 mPa.s
Pressure range atm-400 barg
Pump head material PEEK

FlowSyn Binary Pump Module (Uniqsis)
Peristaltic pump
Flow rates from 5 µl/min up to 10 ml/min
Glass static mixer + Teflon 5 ml coil reactor
10 bar BPR

Intelligent Pump AI-12 (Flom)
Peristaltic pump
Double-plunger reciprocating method
Maximum discharge pressure 5MPa
Range of flow rate setting 0.1-50 ml/min
Pressure limiter upper limit 0-10 MPa

Syringe pumps e.g. Fusion 101 (Chemyx)

Reactors

  • Glass chips: e.g. Glass static reactor 1.6 mL (Uniqsis)
  • PTFE tubing with multiple radii
  • PFA tubing with multiple radii
  • PEEK tubing with multiple radii

Bruker Avance-III 400 MHz NMR Spectrometer equipped with BRUKER 5 mm BBFO 400 MHz Z-gradient high resolution probe

Description

State-of-the-art NMR spectrometer equipped with an observe broadband high resolution probe, fitted with an actively shielded single axis Z-gradient for 5 mm sample diameters and 400 MHz standard-bore or wide-bore magnets. The inner NMR coil can be tuned to observe 19F or any nucleus in the range from 31P to 15N. The outer NMR coil is tuned for either 1H decoupling or observation. The probe is fitted with a 2H lock channel and automatic tuning and matching (ATM).

Signal/Noise

19F sensitivity  ≥250:1  (TFT sample, with 1H decoupling)

31P sensitivity  ≥140:1  (TPP sample)

13C sensitivity  ≥160:1  (ASTM sample)

15N sensitivity  ≥20:1  (90% formamide sample)

1H sensitivity  ≥250:1  (0.1% EB sample, 2ppm noise)

Pulse Widths

19F pulse width  ≤15μs  (TFT sample)

31P pulse width  ≤15μs  (TPP sample)

13C pulse width  ≤10μs  (ASTM sample)

15N pulse width  ≤18μs  (90% formamide sample)

1H pulse width  ≤15μs  (0.1% EB sample)

Lineshape

13C spinning lineshape  ≤0.2/2/4 Hz  (50%/0.55%/0.11%, ASTM)

1H spinning lineshape  ≤0.6/6/12 Hz  (50%/0.55%/0.11%, 1% CHCl3)

Z-gradient

The probe is fitted with an actively shielded single axis Z-gradient.

Maximum gradient strength is 50 gauss/cm

Variable Temperature Range

Variable temperature range is from -150°C to +150°C*

Liquid chromatography – Mass spectrometry

Agilent 1100 LC/MSD SL – Agilent 1200 LC – 1100 Series MSD VL

HPLC : UV detection by DAD

MS : ESI – single quadrupole – electron multiplier

Agilent 1100 Prep LC

HPLC : VWD detection – fraction collector

Agilent 1260 Series

HPLC : UV detection by DAD

MS: ESI – singe quadrupole – electron multiplier

ELSD: Infinity II – Evaporative Light Scattering Detector

Flash chromatography

Chemical separation technique used to purify chemical mixtures.

BUCHI Reveleris X2: Normal phase flash chromatography 

Grace Reveleris: Reversed phase flash chromatography

Shimadzu IRAffinity-1S FTIR Spectrometer

Description

Apparatus to determine IR absorbance/transmittance and to acquire IR spectra.

Thermo Scientific Genesys 180 UV-Vis Spectrometer

Description

Apparatus to determine UV-Vis absorbance/transmittance and to acquire UV-Vis spectra.

CEM Discover Microwave Synthesizer

Description

Apparatus for heating sealed pressure vessels with the power of microwave energy.

Ball Mill Retsch MM400

Description

Apparatus used for chemical synthesis. Alternative for synthesis via batch chemistry. Maximum frequency of 30 Hz.

GC-MS Agilent 8890

Description

The Agilent 8890 Plus GC system is coupled to a quadropole mass selective spectrometer 5977B MSD

Gerstel MPS2 autosampler has various introduction techniques: liquid, dynamic headspace, SPME and thermal absorption

GC-MS Agilent 6890 Plus

gcms2
Description

The Agilent 6890 Plus GC system is coupled to a quadropole mass selective spectrometer 5793 MSD

Gerstel CIS-4 PTV injector

GC-FID

Description

The Agilent 6890N GC system is coupled to a flame-ionization detector

Injector: Agilent 7683 Series 

BUCHI Melting Point M-560

Description

Apparatus to determine melting point of solid pure compounds and boiling point of pure liquids.

Harvest Right Pharmaceutical Freeze Dryer

Description

Freeze drying apparatus to remove water from chemical samples.

Parr High Pressure Reactor 4793

Description

Stainless steel high pressure reactor of 100 mL with maximum pressure of 200 bar. Used for chemical reactions with carbon dioxide gas.

Organic Elemental Analysis 2400 Series II CHNS/O Elemental Analyser

Description

One analyser with three modes of operation : CHN, CHNS and Oxygen

Advanced cumbustion design for handling virtually any type of samples

Frontal chromatography for simple , reliable and accurate measurements

Automated weight entry

Analytical detector range (element range (mgs)):

  • C: 0.001 – 3.6
  • H: 0.001 – 1.0
  • S: 0.001 – 2.0
  • O: 0.001 – 2.0
  • N: 0.001 – 6.0

Services

The SynBioC Research Group is equipped to perform several types of analyses on organic compounds:

  • NMR analyses
  • IR analyses
  • UV analyses
  • GC analyses
  • LC analyses
  • MS analyses

For more information regarding prices and technical aspects , please contact Prof C. Stevens , Prof M. D’hooghe or Prof S. Mangelinckx, Prof T. Heugebaert.

Categories
Services

Laboratory of Pharmaceutical Biotechnology

DNA-fingerprinting

DNA analysis

The Laboratory of Pharmaceutical Biotechnology performs human identification using DNA profiling techniques, mainly for the Department of Justice in Belgium. The laboratory is recognized by the Department of Justice as a forensic DNA laboratory in criminal cases and has a BELAC accreditation since September 15th, 1996.

DNA profiling can be very useful not only in forensic casework but also in paternity testing.

By combination of short tandem repeat loci (STR) in multiplex polymerase chain reactions (PCR), individuals can be identified with very high levels of certainty. Using PCR technology, profiles (and thus identification) can be obtained of very minute and old, badly stored samples.

A DNA profile can be obtained from almost any kind of biological material (e.g. blood(stains), saliva(stains), sperm(stains), skin debris, hair, biological tissues, bones, teeth, …).

In our laboratory a total of 19 STR loci can be analyzed including the 12 ESS loci (the European Set of Standard loci: D3S1358, vWA, FGA, TH01, D21S11, D8S1179, D18S51, D10S1248, D1S1656, D12S391, D2S441 and D22S1045). The remaining 7 STR loci are TPOX, D16S539, D13S317, D5S818, D7S820, SE33 and CD-4. In addition, sex determination can also be performed by analyzing the amelogenin locus on the X- and Y-chromosome. All STR loci are analyzed on an ABI3130xL and/or ABI3500xL genetic analyzer.

Besides the commercially available kits we also created 2 multiplexes of respectively 15 and 9 STR loci in our laboratory. Those 2 multiplexes have 4 STR loci in common, what gives an extra control on the obtained profiles. These multiplexes are extensions of our original multiplex described and published in 1998 in the scientific journal Electrophoresis. The great sensitivity and specificity of this multiplex (which is better than the available commercial kits) was presented on the Second European Symposium on Human Identification in June 1998 in Innsbruck (DNA typing of fingerprints on skin debris: Sensitivity of Capillary Electrophoresis in forensic applications using multiplex PCR).

In special and very urgent cases, DNA identification can be performed within 24 hours after receipt of the samples (max. 2-3 samples). The regular cases are performed in max. 1 month (in fact, in 16 calendar days on average).

A part of the analysis is automated using liquid handlers, avoiding human errors in this way. There is one liquid handler for pre-PCR set-up; a second one is used for processing post-PCR samples.

Besides autosomal STR analysis, we also perform Y-STR analysis. We created a multiplex of 8 STR loci: DYS 19, DYS385a/b, DYS 389I, DYS 389II, DYS390, DYS391, DYS392 and DYS393. This way the minimal haplotype is determined. A commercial kit containing 3 extra loci (DYS437, DYS438 and DYS439) besides the 8 STR mentioned above is also used.

Our lab can also perform analysis of mitochondrial DNA (mtDNA), specifically on samples where nuclear typing has failed or cannot be performed such as hair without a root.

A P.A.L.M. microdissection laser microscope is available in the laboratory. Using the laser microdissection technique, individual cells can be isolated very specifically. Sperms cells, for example, can be isolated from post coital samples. Our laboratory has already published several scientific articles on this subject in a.o. “International Journal Of Legal Medicine”.

DNA research

Besides the routine DNA typing for the Department of Justice, our lab performs research in the field of DNA analysis in order to optimize and improve the procedures. This research includes:

  • optimisation and expansion of the use of P.A.L.M. microlaser system in forensic cases
  • optimisation of DNA extraction
  • statistical interpretation of the data
Scientific articles

The publications produced by our laboratory in various scientific journals can be consulted using the following links: